Publications

Landis, MJ, EJ Edwards, & MJ Donoghue. 2020. Modeling phylogenetic biome shifts on a planet with a past. bioRxiv, 832527 (under review).
[paper]

Landis, MJ, DAR Eaton, WL Clement, B Park, EL Spriggs, PW Sweeney, EJ Edwards, & MJ Donoghue. 2020. Joint phylogenetic estimation of geographic movements and biome shifts during the global diversification of Viburnum. Systematic Biology (accepted).
[paper]

Kim, AS, O Zimmerman, JM Fox, CA Nelson, K Basore, R Zhang, L Durnell, C Desai, C Bullock, SL Deem, J Oppenheimer, B Shapiro, T Wang, S Cherry, CB Coyne, SA Handley, MJ Landis (+), DH Fremont (+), & MS Diamond (+). 2020. An evolutionary insertion in the Mxra8 receptor binding site confers resistance to alphavirus infection and pathogenesis. Cell Host & Microbe 27:428-440.
[paper]

Landis, MJ. 2019. Biogeographic dating of phylogenetic divergence times using priors and processes in The Molecular Evolutionary Clock: Theory and Practice (SYW Ho, ed.). Springer (accepted).
[paper]

Braga, MP, MJ Landis, S Nylin, N Janz, & F Ronquist. 2019. Bayesian inference of ancestral host-parasite interactions under a phylogenetic model of host repertoire evolution. Systematic Biology (accepted).
[paper]

Quintero, I and MJ Landis 2019. Interdependent phenotypic and biogeographic evolution driven by biotic interactions. Systematic Biology (accepted).
[paper] [software]

Field, DJ, JS Berv, AY Hsiang, R Lanfear, MJ Landis, and A Dornburg. 2019. Timing the extant avian radiation: The rise of modern birds, and the importance of modeling molecular rate variation. Bulletin of the American Natural History Museum (accepted)
[paper]

Landis, MJ, WA Freyman, & BG Baldwin. 2018. Retracing the silversword radiation despite phylogenetic, biogeographic, and paleogeographic uncertainty. Evolution, 72:2343-2359.
[paper] [scripts]

Park, B, M Sinnott-Armstrong, C Schlutius, JC Zuluaga, EL Spriggs, RG Simpson, E Benavides, MJ Landis, PW Sweeney, DAR Eaton, MJ Donoghue. 2018. Sterile marginal flowers increase visitation and fruit set in the hobblebush (Viburnum lantanoides, Adoxaceae) at multiple spatial scales. Annals of Botany, 123:381-390.

Landis, MJ and JG Schraiber. 2017. Pulsed evolution shaped modern vertebrate body sizes. Proceedings of the National Academy of Sciences, 114:13224-13229.
[paper] [software]

Höhna, S, MJ Landis, and JP Huelsenbeck. 2017. Parallel power posterior analyses for fast computation of marginal likelihoods in phylogenetics. Bioinformatics, Accepted.
[paper (pre-print)]

Landis, MJ. 2017. Biogeographic dating of speciation times using paleogeographically informed processes. Systematic Biology, 66:128-144.
[paper] [scripts]

Höhna, S, MJ Landis, and TA Heath. 2017. Phylogenetic Inference Using RevBayes. Current Protocols in Bioinformatics, 57:6.16-6.16.34.
[paper]

Höhna, S, MJ Landis, TA Heath, B Boussau, N Lartillot, BR Moore, JP Huelsenbeck, & F Ronquist. 2016. RevBayes: Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language. Systematic Biology, 65:726-736.
[paper] [software]

Schraiber, JG and MJ Landis. 2015. Sensitivity of quantitative traits to mutational effects and number of loci. Theoretical Population Biology, 102:85-93.
[paper] [scripts]

Höhna, S, TA Heath, B Boussau, MJ Landis, F Ronquist, & JP Huelsenbeck. 2014. Probabilistic graphical model representation in phylogenetics. Systematic Biology, 63:753-771.
[paper]

Landis, MJ and T Bedford. 2014. Phylowood: interactive web-based animations of biogeographic and phylogeographic histories. Bioinformatics, 30:123-124.
[paper] [software]

Landis, MJ, NJ Matzke, BR Moore, & JP Huelsenbeck. 2013. Bayesian Analysis of Biogeography when the Number of Areas is Large. Systematic Biology, 62:789-804.
[paper] [software]

Landis, MJ (*), JG Schraiber (*), & M Liang. 2013. Phylogenetic Analysis Using Lévy Processes: Finding Jumps in the Evolution of Continuous Traits. Systematic Biology, 62:193-204.
[paper] [software]


(*) shared first authorship; (+) shared corresponding authorship